Jhu data archive software

The effect of microstructural parameters on the material response can be obtained by perturbing the input. The ferdinand hamburger university archives collects, preserves, promotes, and provides access to the history of johns hopkins university. Data definition the ssusi ground data analysis software creates ssusi level 1b data geolocated, calibrated, background subtracted instrument resolution radiances, grids that data into ssusi sensor data records sdrs, and then uses the gridded data to retrieve environmnetal parameters in environmental data records edrs. Other downloads software such as microsoft office, windows, adobe, and mathematica is available through the myjhu portal. Join jhu data services for an overview of types of identifiers and how to determine if your data have disclosure risk. Hugh hawkins fellows margo peyton and michael healey. Caworks has been further enhanced with a browser plugin module for the extensible neuroimaging archive toolkit xnat. Other data sets, formerly available through sdc platinum, are in the thomson one database. The software was run with matlab version r2018b on mac os 10.

Idies will provide faculty, researchers and students with the structure and resources needed to accomplish these goals. Financial times historical archive 18882010 financial times historical. We can help you deposit your data into the jhu data archive or into another preservation and sharing option. You do not need to be affiliated with the johns hopkins university to use the system. Help contents johns hopkins university academic software. Fee based contractual service models, rapid service launch. Data management and sharing deidentifying phi data arcgis and web mapping archiving locating the best data sharing options for your field data archiving with icpsr for social science, public health and restricted data jhu data archive s. The software catalog is a robust online system where faculty, staff, and students can browse more than 150 popular software items e.

Data associated with the 2020 plos one publication. Johns hopkins is a member of icpsr, and the archives contents are searchable and accessible to the johns hopkins community online. This is the data repository for the 2019 novel coronavirus visual dashboard operated by the johns hopkins university center for systems science and engineering jhu ccse. These services give researchers the opportunity to share their data outside of original collaborations and beyond the life of a research project. Founded as the american religion data archive in 1997 and going online in 1998, the initial archive. More information about the benefits of archiving data. A new software catalog has replaced spars, the system used by johns hopkins faculty, staff and students to purchase software. Stringtie is a fast and highly efficient assembler of rnaseq alignments into potential transcripts. This archive provides the data both raw and the processed and matlab scripts used to generate the results in uyanik et al.

Interactive online tutorial about using file names to organize research data. Apr 06, 2020 the institute for data intensive engineering and science will foster education and research in applying data intensive technologies to problems of national interest in physical and biological sciences and engineering. Software and data analysis guides johns hopkins university. The campus owns licenses to many software packages, but finding a list of all of them can be tricky. Mar 06, 2020 guidance on preserving the software components of the research process e. If you are looking for the ces edupack or other departmentspecific software, please visit the whiting school of engineering software page. Notice all ssusi data products have been updated with an improved calibration that corrects scan mirror reflectivity degradation artifacts overview. Eisenhower express request msel items for delivery to your office or email findit see if specific articles or journals are available at jhu. Home data and statistics guides at johns hopkins university. The substance abuse and mental health data archive. The institute for data intensive engineering and science. The current version, lssnppdb, provides information useful for identifying aminoacid changing snps nssnps that are most likely to have an impact on biological function. Data science johns hopkins whiting school of engineering.

Everyone affiliated with johns hopkins who currently holds an active jhed id and password can download arcgis software for use on their office or personal computer. Apr 10, 2019 the data fund provides jhu researchers the opportunity to make requests for known datasets that are not readily accessible via the library data subscriptions. Large datasets jhu astrophysicists are among the worlds leading developers of new astronomical tools. The software may not be used for commercial purposes. Archiving research data is not simply taking stored data out of active use. Archiving data from any research discipline with any file format. Research data can be archived into the jhu data archive.

Data services supports jhu researchers, faculty, and students on the. We develop computational models to interpret and predict the impact of individual variation in the genome, transcriptome, and proteome. The xnat software facilitates the storage and management of neuroimaging and associated data. These include matlab, mathematica, stataic, envi 5. Novel coronavirus covid19 cases, provided by jhu csse 2019 novel coronavirus covid19 2019ncov data repository by johns hopkins csse. Open data johns hopkins center for government excellence. The guvi data products are all written using a platform independent binary file format called netcdf network common data format and are not humanreadable. Its input can include not only alignments of short reads that can also be used by. The portal, core in a box, was developed by a team of core facility experts and users from the johns hopkins. Accepts data from any research discipline and file format. Central administration, zanvyl krieger school of arts and sciences, g. From there, please click on mysoftware, and then follow the links to access the software catalog.

The software is made available by the sheridan libraries for teaching, research, course work, and most administrative purposes. The archives serves as the official records depository for the homewood campus divisions of johns hopkins university. Beginning in 2003, the defense meteorological satellite program dmsp satellites began carrying the ssusi instrument a combination of spectrographic imaging and photometric systems designed to remotely sense the ionosphere and thermosphere. Special collections and archives uses the aeon system to register researchers and help them request materials. We provide research data archiving through an instance of the data conservancy dc stack, called the jhu data archive. We provide 16 additional sequences used in 2, 3 and 4 that present missing data and outliers. Mar 03, 2020 in conjunction with the introduction of zoom for online meetings, adobe connect will be retired at the end of 2019. The effect of microstructural parameters on the material response can be obtained by perturbing.

Statistical characterization and reconstruction of a subgrain microstructure of ni based superallo rene 88dt this project focuses on the statistical characterization and subsequent reconstruction of a subgrain microstructure from the ni based superalloy rene 88dt. Located on the homewood campus, the technology store is your onestopshop for all your computing and mobile device needs. Data associated with nnipsnepal quality of maternal and. Data repositories for sharing data archived data collections can be more easily shared, whether by direct request or via websites. Sheridan libraries support johns hopkins covid19 tracking maps sheridan libraries data specialists are providing 247 technical support for an interactive, webbased dashboard that is tracking the coronavirus outbreak in near real time. Data processing payload operations center software. We ask that researchers register with aeon in advance of their visit. For technical management students, as of fall 2017, 595.

Authors of publications based on data in the jhu data archive are asked to send citations of their published works to the johns hopkins data archive for inclusion in a database of related publications. How to share your data guides johns hopkins university. If you have recorded content in connect that you want to keep, contact the cer or work with kitcats to export your recordings. Visit the jhu information technology page to see what antivirus protection is appropriate for your personal and jhu owned computer. The johns hopkins university data management services, offered by the sheridan libraries, helps researchers develop data management plans and both preserve and share research data. The campus owns licenses to many software packages, but finding all of them can be. The space telescope science institute stsci is the science operations center for the hubble space telescope and for the james webb space telescope. Currently, the jhu data archive operates on the dataverse repository software platform. Our department is a full member of the sloan digital sky survey, which mapped a quarter of the sky and obtained spectra of a million galaxies, 100,000 quasars, and sundry stars and other interesting objects in its first and second phase.

Ways to share research data the sheridan libraries. Each sequence in the hopkins 155 dataset contains only complete trajectories and no outliers. Homewood and medical campuses johns hopkins bloomberg. These records reflect much of the administrative and scientific activities of the stsci, from the early planning stages of the hubble space telescope in the 1960s to the next generation james webb space telescope in the early 21st century.

Data services supports jhu researchers, faculty, and students on the homewood and east baltimore campuses with a spectrum of resources for working with data to make your research and teaching successful. Johns hopkins university institute for computational medicine 208 hackerman hall 3400 north charles street baltimore md. Engineering for professionals is part of the johns hopkins university, which is accredited by the middle states commission on higher education, 3624 market street, philadelphia, pa 19104. Data services supports researchers, faculty, and students with a spectrum of resources for working with data to make your research and teaching successful. Wharton research data service jhu faculty and graduate students for academic research only wharton research data service jhu faculty and graduate students for. Home data management guides at johns hopkins university. Provides each dataset with a permanent citation and doi. To find newly installed software on the apps menu in windows 8 or 8. New software catalog for johns hopkins faculty, staff, and students. Six online training modules 22 minutes total have been created covering. The models are being applied to cancer genomics, unclassified variants in mendelian. Software access gis and maps guides at johns hopkins. It focuses on system administration and software development related to the institutional repository, data archive. The johns hopkins university data archive 2015 gives a brief overview of this book by erin aeran chung et al it examines how national policies and immigrant advocacy groups shape collective identity formation, solidarity networks, and strategies for political empowerment among immigrants and their descendants in japan, south korea, and.

Share code or software data management guides at johns. Lssnp is a web tool for genomewide annotation of human snps. Social explorer create custom tables and maps from the first census to the latest census, the american community survey, and the religious congregations and membership study. This is the data repository for the 2019 novel coronavirus visual dashboard operated by the johns hopkins university center for systems science and engineering jhu csse. In moving forward with a research software archiving service, jhudms is currently in the process of addressing some of these challenges, including identifying and implementing metadata suitable for use in the jhu data archive, and identifying gaps in the development and use of research software e. Each year, the library is able to provide a small amount of funding to a select number of researchers to facilitate their use of secondary data.

Access to siku quanshu online is restricted to johns hopkins university ip addresses. Open data archives johns hopkins center for government. This data archive contains modeling code, inputs, and outputs for the paper using particle tracking to understand flowpaths, age distributions, and the paradoxical origins of the inverse storage effect in an experimental catchment. These snakes have to regularly travel across boulders and fallen trees. The datasets are under a creative commons attributionnoncommercial 4. The first half of this 3hour workshop will focus on some basic concepts of. Whiting it has a service for our users where software can be downloaded and licenses obtained. Our jhu data management services jhudms fosters data management best practices by providing guidance, education and training and offering data archiving and sharing services in support of researcher, institution, and agency goals. Data management and sharing deidentifying phi data arcgis and web mapping archiving locating the best data sharing options for your field data archiving with icpsr for social science, public health and restricted data jhu data archive for all fields arcgis desktopproonline.

This inperson introduction to r workshop is for people who want to learn this data analysis tool but have little or no experience in any programming languages. Howto new user jhed reset forgotten password connect to wireless at homewood campus connect to hopkins vpn jhpulse purchase software departmental purchase software personal get help with blackboard get help with sis use panopto lecture capture. Interactive html toolbox for data management specialists. Data driven discovery of a novel sepsis preshock state predicts impending septic shock in the icu. These data and software are distributed by the jhu data archive. Computer science johns hopkins university engineering for.

Library staff will assist with the login procedure. Mar 25, 2014 at johns hopkins university, jhu researchers may deposit their research data into the jhu data archive. The datasets are under a creative commons attribution 4. Evaluation of a quality assurance program designed to ensure that 3 actors performing in simulated medical encounters. A repository where johns hopkins researchers can share, archive, and get citations for their data. Data services provide free assistance in developing data management and sharing plans in either case and for all funding agencies. New software catalog for johns hopkins faculty, staff, and. Archiving data services jhu data services johns hopkins. Interlibrary services request articles, books and more from other libraries. As an apple authorized service provider, we feature the latest line of apple laptops and tablets, with special academic pricing that is typically even lower than the sale prices from apple, amazon, best buy, and other major retailers.

Data services provides free access to the esri suite of arcgis software for members of the jhu community and we are available for individual and group consultations to help you find the best tools and resources to fit your research needs. Archivesspace is a database for locating university records and manuscript collections held by johns hopkins university, in the special collections research center of the sheridan libraries and the peabody archives. Consult with researchers provide tools for planning data conservancy. Connecting either from the campus network or via vpn, please navigate to. National commission on libraries and information science. This is a 22 minutes online training module created by jhu data management services to help researchers make their research software more reproducible and easier to. Student teams will conduct case studies for a project. Whiting school of engineering, carey business school, the school. R is an open source software for statistical computing and graphics. The association of religion data archives arda strives to democratize access to the best data on religion.

The johns hopkins university has created and launched a new web portal dedicated to providing the johns hopkins research community access to its comprehensive research core facilities and resources for core development and management. Offered through johns hopkins engineering for professionals, which administers parttime and online graduate studies for the whiting school of engineering, the masters degree in data science prepares students for specialized jobs involving all aspects of data science, from the data pipeline and storage to statistical analysis and eliciting. Learn how and why your software can be preserved over time archiving you can access this 22minute training via the data management services page of the sheridan libraries website. A jhu data management consultant can help you assess your options for a sharing solution. The files listed below are removed 48 hours after their creation. The program allows for inexact matching of adapters and polya sequences thus accounting for mismatches and indels due to sequencing errors. If you are considering archiving and sharing data for a grant project, please contact jhu data services before submitting the proposal. This is usually because the software s icon gets moved from the desktop to the apps menu after installation. Because the database contains archaic chinese characters that are not part of the unicode standard, there is no direct url that references the database in an internet browser. The digital research and curation center drcc develops and supports the information technology infrastructure of the sheridan libraries. Archiving services are provided by jhu data management for the johns hopkins research community through the jhu data archive. Manage data data management guides at johns hopkins.

Jul 10, 2014 johns hopkins data management services provides archiving services for the johns hopkins research community through the jhu data archive. The institute for data intensive engineering and science will foster education and research in applying data intensive technologies to problems of national interest in physical and biological sciences and engineering. Best practices for writing, documenting, and organizing code. Founded as the american religion data archive in 1997 and going online in 1998, the initial archive was targeted at researchers interested in american religion. By studying how snakes move, a team of johns hopkins engineers have created a robot that can nimbly and stably climb large steps. Software and data analysis johns hopkins university.

Jhu data archive archival process data conservancy. We can help you consider all options for data repositories, including the jhu data archive. Johns hopkins technology store information technology. Vi news from jhu data management services jhu data management services dms is expanding archiving services to include research software scripts, models, data processing, etc. Many ksaslicensed software titles used in our computer classrooms are available on our remote app server, stone. Johns hopkins university defines research data records that would be. These sequences have the same format as the hopkins 155 sequences. Preserves research data through regularly checking file integrity and retaining multiple copies if you are considering archiving and sharing data for a grant project, please contact jhu data services before submitting the proposal. Giving each dataset a permanent citation and doi, facilitating both author attribution and linkage to associated publications. Learn more about borrowing and requesting materials. Data services operate s the jhu data archive and provide s consulting to help you prepare your project data for longerterm access by you and your research community. New service for archiving research data the sheridan. Research fellowships are available for periods between four and twelve weeks in length for projects utilizing primary source materials in the rare book, manuscript, and archival collections of the sheridan libraries.